top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SUMF2-10:1 | OSCC | 12 | 0.999999 | coding | 332 | chr7 | 56288229 | 56291425 | + | 0.9737 | lnc-SUMF2-10 | 1 | 0 | 0 | 0 | 2 | coding | 0.68698267 | QMNPLTEDILNR | n[145]QM[147]NPLTEDILNR | LIDSWSKLIKNADIKNAQEALQAIETKVALMLQLLIHEEDDISPNIIGFCYYYLHIWKQLTVLLDQQKANVEAIMLAVMKKLTYDEEYNFENEGEDEAMFVEYRKQLKLLLDRLAQVSPELLVASVHSVFSSTLQDWQTTWFMEVEVAIRLLYMLAEALLVSHGVPFAGDVSKASALQDMMRILVTSRVSSYQHTSVTLEFFKNVVRYEKFFTVEPQHIPRVLMAFLDHRSLRHSSAKVRSRMAYLFSRFVKSLNKQMNPLTEDILNRIQDLLELSPPENGHQSLLGSDDQLFIYETAGVLTVNSEYLAERKQALVRNLLTPLMEKFKILLE |
lnc-SUMF2-10:1 | OV | 9 | 0.999999 | coding | 42 | chr7 | 56288229 | 56291425 | + | 0.9904 | lnc-SUMF2-10 | 1 | 0 | 0 | 0 | 3 | coding | 0.68698267 | ALAYFERLK | n[145]ALAYFERLK | MGEQAVLGPKSNADSDFRQRALAYFERLKISPDTWQVCAQRL |
lnc-SUMF2-10:1 | OV | 17 | 0.999999 | coding | 42 | chr7 | 56288229 | 56291425 | + | 0.6894 | lnc-SUMF2-10 | 1 | 0 | 0 | 0 | 6 | coding | 0.68698267 | GEQAVLGPKSNADSDFR | n[145]GEQAVLGPKSNADSDFR | MGEQAVLGPKSNADSDFRQRALAYFERLKISPDTWQVCAQRL |
lnc-SUMF2-10:1 | OV | 12 | 0.999999 | coding | 42 | chr7 | 56288229 | 56291425 | + | 0.1737 | lnc-SUMF2-10 | 1 | 0 | 0 | 0 | 1 | coding | 0.68698267 | ISPDTWQVCAQR | n[145]ISPDTWQVCAQR | MGEQAVLGPKSNADSDFRQRALAYFERLKISPDTWQVCAQRL |
lnc-SUMF2-16:1 | BRCA-HER2-enriched | 17 | 0.879721 | coding | 95 | chr7 | 56576244 | 56598089 | + | 0.0693 | lnc-SUMF2-16 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.309284644 | FAGASINIAPAEAPDAK | n[145]FAGASINIAPAEAPDAK | LSNQKRRLFICLSRLYQSVSSSASRAKHIKQLSRFAGASINIAPAEAPDAKVRMVMITGPPEAHFKAQGRIYGKTKEENFVSPKEEVKLEAYITV |
Page 1 of 1
bottom of page