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McDonnell Genome Institute
Washington University
Transcript
lnc-SUMF2-10:1
Chromosome
chr7
Gene Name
lnc-SUMF2-10
Start
56288229
CPC Label
coding
End
56291425
Cancer
HCC
Strand
+
Peptide
LLYMLAEALLVSHGVPFAGDVSK
Modified Peptide
LLYM[147]LAEALLVSHGVPFAGDVSK
Peptide Length
23
ORF Length
332
Open Reading Frame (ORF)
LIDSWSKLIKNADIKNAQEALQAIETKVALMLQLLIHEEDDISPNIIGFCYYYLHIWKQLTVLLDQQKANVEAIMLAVMKKLTYDEEYNFENEGEDEAMFVEYRKQLKLLLDRLAQVSPELLVASVHSVFSSTLQDWQTTWFMEVEVAIRLLYMLAEALLVSHGVPFAGDVSKASALQDMMRILVTSRVSSYQHTSVTLEFFKNVVRYEKFFTVEPQHIPRVLMAFLDHRSLRHSSAKVRSRMAYLFSRFVKSLNKQMNPLTEDILNRIQDLLELSPPENGHQSLLGSDDQLFIYETAGVLTVNSEYLAERKQALVRNLLTPLMEKFKILLE
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.999999
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.0997
PhyloCSF Frame 3
0
CNTI Score
0.68698267
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