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McDonnell Genome Institute
Washington University
Transcript
lnc-SUMF2-16:1
Chromosome
chr7
Gene Name
lnc-SUMF2-16
Start
56576244
CPC Label
coding
End
56598089
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
FAGASINIAPAEAPDAK
Modified Peptide
n[145]FAGASINIAPAEAPDAK
Peptide Length
17
ORF Length
95
Open Reading Frame (ORF)
LSNQKRRLFICLSRLYQSVSSSASRAKHIKQLSRFAGASINIAPAEAPDAKVRMVMITGPPEAHFKAQGRIYGKTKEENFVSPKEEVKLEAYITV
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.879721
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.0693
PhyloCSF Frame 3
0
CNTI Score
-0.309284644
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