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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TP53TG3C-4:2 | OV | 26 | 0.176151 | noncoding | 41 | chr16 | 32886225 | 32888628 | + | 0.3807 | lnc-TP53TG3C-4 | 0.104 | -5.193 | -2.198 | -5.205 | 1 | noncoding | -0.297719719 | ALGAEGREDFQMLLVQGVGVEGRESR | n[145]ALGAEGREDFQMLLVQGVGVEGRESR | LRESAGHRQRALGAEGREDFQMLLVQGVGVEGRESRGSRGM |
lnc-TP53TG3C-4:2 | OV | 15 | 0.176151 | noncoding | 41 | chr16 | 32886225 | 32888628 | + | 0.6866 | lnc-TP53TG3C-4 | 0.104 | -5.193 | -2.198 | -5.205 | 1 | noncoding | -0.297719719 | ESAGHRQRALGAEGR | n[145]ESAGHRQRALGAEGR | LRESAGHRQRALGAEGREDFQMLLVQGVGVEGRESRGSRGM |
lnc-TP53TG3F-34:1 | HCC | 16 | 0.0836494 | noncoding | 85 | chr16 | 35552908 | 35554001 | + | 0.7885 | lnc-TP53TG3F-34 | 1 | 0 | 0 | 0 | 6 | coding | 0.635942215 | SISTMYWLDGVHSGGR | n[230]SISTM[147]YWLDGVHSGGR | LKEAKKDKNIDAFIKSISTMYWLDGVHSGGRNTGVTYPQVLKEFAQTRIIVHTHGTLYQVCDLMRSCIGKEQNKFFRYLGILVCW |
lnc-TP53TG3F-9:3 | CCRC | 12 | 0.0523165 | noncoding | 36 | chr16 | 35237299 | 35253040 | + | 0.9987 | lnc-TP53TG3F-9 | 0.032 | 0 | 0 | 0 | 1 | noncoding | -0.352555011 | IHMLILSPPVPK | n[230]IHM[147]LILSPPVPK | LNCVLPKIHMLILSPPVPKDVTTFGDSIIKEVIILK |
lnc-TP53TG5-5:3 | BRCA-HER2-enriched | 8 | 0.201138 | noncoding | 154 | chr20 | 45435061 | 45439366 | - | 0.9976 | lnc-TP53TG5-5 | 0.368 | -3.499 | -3.826 | -4.007 | 48 | noncoding | -0.309187427 | APHIELQK | n[145]APHIELQK | LNQPPLHLERVGLMPKMGHHADIILRPKPTLSCGRDKTTTVSWSHATWHLVSPRKAPHIELQKLPFPRLTTRGRRTLRLGRALRRSCPDPRPRGAVKTHWASQGSAALRAANRKYLPPGQSARGLVVLRSWKAWTLRRRGIRRVCRQSQQLAPA |
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