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McDonnell Genome Institute
Washington University
Transcript
lnc-TP53TG3F-34:1
Chromosome
chr16
Gene Name
lnc-TP53TG3F-34
Start
35552908
CPC Label
noncoding
End
35554001
Cancer
HCC
Strand
+
Peptide
SISTMYWLDGVHSGGR
Modified Peptide
n[230]SISTM[147]YWLDGVHSGGR
Peptide Length
16
ORF Length
85
Open Reading Frame (ORF)
LKEAKKDKNIDAFIKSISTMYWLDGVHSGGRNTGVTYPQVLKEFAQTRIIVHTHGTLYQVCDLMRSCIGKEQNKFFRYLGILVCW
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
6
CPC Coding Probability
0.0836494
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.7885
PhyloCSF Frame 3
0
CNTI Score
0.635942215
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