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McDonnell Genome Institute
Washington University
Transcript
lnc-TP53TG5-5:3
Chromosome
chr20
Gene Name
lnc-TP53TG5-5
Start
45435061
CPC Label
noncoding
End
45439366
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
APHIELQK
Modified Peptide
n[145]APHIELQK
Peptide Length
8
ORF Length
154
Open Reading Frame (ORF)
LNQPPLHLERVGLMPKMGHHADIILRPKPTLSCGRDKTTTVSWSHATWHLVSPRKAPHIELQKLPFPRLTTRGRRTLRLGRALRRSCPDPRPRGAVKTHWASQGSAALRAANRKYLPPGQSARGLVVLRSWKAWTLRRRGIRRVCRQSQQLAPA
Conservation Score
0.368
PhyloCSF Frame 1
-3.499
No. of Spectra
48
CPC Coding Probability
0.201138
PhyloCSF Frame 2
-3.826
CNTI Index
noncoding
Max Probability
0.9976
PhyloCSF Frame 3
-4.007
CNTI Score
-0.309187427
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