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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TRIM49B-5:1 | OV | 17 | 0.88137 | coding | 163 | chr11 | 48893255 | 48898703 | + | 0.2098 | lnc-TRIM49B-5 | 0.746 | 0 | 0 | 0 | 1 | noncoding | -0.346681226 | MTSTMALQAVLGRSQQK | n[145]MTSTM[147]ALQAVLGRSQQK | MTSTMALQAVLGRSQQKSTGVETKDQAHRNRDPRGLQGGVLTARLPHTCWLGRLFKMQVSLELFCGHQEHYLTSPVLAPRYPVHLGKDGTHWEQGPNTPTPEQRGTWGNRQLFAVLPLLFCTSLETMSIGYSVVVAGQVATHQGSDATSARAKLPDTGCSNDN |
lnc-TRIM49B-5:1 | OV | 7 | 0.88137 | coding | 163 | chr11 | 48893255 | 48898703 | + | 0.8903 | lnc-TRIM49B-5 | 0.746 | 0 | 0 | 0 | 3 | noncoding | -0.346681226 | STGVETK | n[145]STGVETK | MTSTMALQAVLGRSQQKSTGVETKDQAHRNRDPRGLQGGVLTARLPHTCWLGRLFKMQVSLELFCGHQEHYLTSPVLAPRYPVHLGKDGTHWEQGPNTPTPEQRGTWGNRQLFAVLPLLFCTSLETMSIGYSVVVAGQVATHQGSDATSARAKLPDTGCSNDN |
lnc-TRIM49B-9:1 | HCC | 8 | 0.0216906 | noncoding | 75 | chr11 | 49432409 | 49434524 | + | 0.2064 | lnc-TRIM49B-9 | 1 | 0 | 0 | 0 | 4 | noncoding | -0.343806286 | LGKQSSIK | LGKQSSIK | LGKQSSIKGEVAFFLEHQARRLDKRLVLGALFPEPRPYNFVWISNAGGTALRKSSSCHKSKKTCGIFLSPICRRG |
lnc-TRIM55-1:8 | OV | 7 | 0.0406818 | noncoding | 120 | chr8 | 66112666 | 66114779 | + | 0.994 | lnc-TRIM55-1 | 0.788 | -1.807 | -3.56 | 0 | 6 | noncoding | -0.359693569 | RDSSEAK | n[145]RDSSEAK | LPAGGVPRPSGPSLHPAGVGPVALVRPPGLKVQRTLQKSKLLAFAVWGRQRRDSSEAKLPIVRGDPQGKQNKKQRTWKRTLITLNVCSTEEAGTVRPHLKSAGRTAWLWADPRWIGQGKR |
lnc-TRIM56-1:1 | OV | 17 | 0.0555924 | noncoding | 80 | chr7 | 101094046 | 101097967 | + | 0.2302 | lnc-TRIM56-1 | 0.44 | -2.907 | 0 | -3.907 | 3 | noncoding | -0.357965888 | IIVECLEGGGSFVEFTK | n[145]IIVECLEGGGSFVEFTK | LGLRMKVSERMRLSYERRGRSQGGGSHPAGAQPGGRAIGAGWQSKEPLWEGLQRSGSPLPGDRIIVECLEGGGSFVEFTK |
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