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McDonnell Genome Institute
Washington University
Transcript
lnc-TRIM55-1:8
Chromosome
chr8
Gene Name
lnc-TRIM55-1
Start
66112666
CPC Label
noncoding
End
66114779
Cancer
OV
Strand
+
Peptide
RDSSEAK
Modified Peptide
n[145]RDSSEAK
Peptide Length
7
ORF Length
120
Open Reading Frame (ORF)
LPAGGVPRPSGPSLHPAGVGPVALVRPPGLKVQRTLQKSKLLAFAVWGRQRRDSSEAKLPIVRGDPQGKQNKKQRTWKRTLITLNVCSTEEAGTVRPHLKSAGRTAWLWADPRWIGQGKR
Conservation Score
0.788
PhyloCSF Frame 1
-1.807
No. of Spectra
6
CPC Coding Probability
0.0406818
PhyloCSF Frame 2
-3.56
CNTI Index
noncoding
Max Probability
0.994
PhyloCSF Frame 3
0
CNTI Score
-0.359693569
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