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McDonnell Genome Institute
Washington University
Transcript
lnc-TRIM49B-9:1
Chromosome
chr11
Gene Name
lnc-TRIM49B-9
Start
49432409
CPC Label
noncoding
End
49434524
Cancer
HCC
Strand
+
Peptide
LGKQSSIK
Modified Peptide
LGKQSSIK
Peptide Length
8
ORF Length
75
Open Reading Frame (ORF)
LGKQSSIKGEVAFFLEHQARRLDKRLVLGALFPEPRPYNFVWISNAGGTALRKSSSCHKSKKTCGIFLSPICRRG
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
4
CPC Coding Probability
0.0216906
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.2064
PhyloCSF Frame 3
0
CNTI Score
-0.343806286
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