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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16|69155870|69167185|+|6|circRNA|CIRH1A|ENST00000314423.11|11,12,13,14,15,16 | circCIRH1A(11,12,13,14,15,16) | CIRH1A | MTKPYSTIHFLPRMNQMSSGGAQLMLLKFLRYIRVLRTLSVAVSPHVEVG | MNQMSSGGAQLMLLK | No | Alternative | Junction | 15 | 2 | ATG | TAG | NA | No |
chr16|69334520|69336712|-|2|circRNA|COG8|ENST00000306875.8|3,2 | circCOG8(3,2) | COG8 | LGATEGLTIPAGAGDRPLPGHRRPPGLSAGPVHVLWAVLQPGGS | LGATEGLTIPAGAGDRPLPGHR | No | Alternative | Alternative | 22 | 3 | CTG | TGA | TransCirc | No |
chr16|69366806|69368482|-|2|circRNA|TERF2|ENST00000254942.7|7,6 | circTERF2(7,6) | TERF2 | LVHRILRQPLQNWTRRIWFFLLKLSQHHQPSKTRDPEKMKTKVQPRLTVRVARNCSPRTSA | LTVRVAR | No | Alternative | Alternative | 7 | 3 | CTG | TGA | NA | No |
chr16|69366806|69372355|-|4|circRNA|TERF2|ENST00000254942.7|7,6,5,4 | circTERF2(7,6,5,4) | TERF2 | MMTLKAAFKTLSGAQDSEAAFAKLDQKDLVLPTQALPASPALKNKRPRKDENESSAPADGEGGSELQPKNKRMTISRLVLEEDSQSTEPSAGLNSSQEAASAPPSKPTVLNQPLPGEKNPKLSLFVSKTKNLKRLQKF | LSLFVSK | No | Alternative | Junction | 7 | 2 | ATG | TGA | NA | No |
chr16|69368375|69372355|-|3|circRNA|TERF2|ENST00000254942.7|6,5,4 | circTERF2(6,5,4) | TERF2 | LSPLPQVQGRKINSQHQGLWKSHPENPQGCHYLYQKQRI | LSPLPQVQGR | No | Alternative | Junction | 10 | 2 | CTG | TGA | NA | No |
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