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Long-Read CircRNA Encoded Peptides
Use criteria below to search among 2,148 circRNA peptides detected by long-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"
​*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Short-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr9|5821758|5821930|1|172|0 | circENST00000214893(NE) | ENST00000214893 | MENTQTHSCLHGALTFFTIGKKTECPLSFRIFFCCFLIWWLLHVSWR | TECPLSFR | No | Alternative | Junction | 8 | 1 | ATG | TGA | NA |
chr9|5821758|5821930|1|172|0 | circENST00000214893(NE) | ENST00000214893 | MENTQTHSCLHGALTFFTIGKKTECPLSFRIFFCCFLIWWLLHVSWR | TECPLSFRIFFCCFLIWWLLHVSWR | No | Junction | Junction | 25 | 1 | ATG | TGA | NA |
chr9|6757970|6758203|1|233|0 | circKDM4C(L1) | KDM4C | LCACAANSCHLVRNKSPKFPKSPWAGGHCLLFLLHRVVLSPQPARQGEPAVRAPSPLPPTHPLDGRVRRGAVIGRPGSCARAQRTAVT | QGEPAVR | No | Alternative | Junction | 7 | 3 | CTG | TAG | NA |
chr9|72210686|72219506|3|29,57,28|0,3248,8792 | circGDA(NE,S2,4) | GDA | MEQPLTLFQNTRRPLRNRSRKLRDLCQKCSKRTGEH | MEQPLTLFQNTR | No | Alternative | Junction | 12 | 2 | ATG | TAA | TransCirc |
chr9|72250089|72250419|1|330|0 | circGDA(NE) | GDA | LLLAFARSYTFTFFKGVHFDVEHQFSCRLRTHVQ | LLLAFAR | No | Alternative | Alternative | 7 | 1 | CTG | TAA | NA |
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