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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,856 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
​*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrY|1412731|1428121|-|6|circRNA|ASMTL|NM_001173474_DUP1|11,10,9,8,7,6 | circASMTL(11,10,9,8,7,6) | ASMTL | LSCTSCAGSCMTGQTTKSTSYSAGSPRAASQGQSWRLRDPGPGRHAGGVRTRGLSERGGIPAEPLLQAAGEALLPAPSGGPAAECQARLHPGRGHLRRPQ | DPGPGRHAGGVR | No | Alternative | Junction | 12 | 1 | CTG | TGA | NA |
chrY|1421657|1432377|-|4|circRNA|ASMTL|NM_001173474_DUP1|8,7,6,5 | circASMTL(8,7,6,5) | ASMTL | LASDGEYSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQTISWTPGSRNSTRKRR | AEDLFQTISWTPGSRNSTR | No | Junction | Junction | 19 | 3 | CTG | TGA | NA |
chrY|1593443|1595532|+|2|circRNA|AKAP17A|ENSTR0000313871.7|2,3 | circAKAP17A(2,3) | AKAP17A | MPQLRSGSWRGRSFRNWSSKEKNKSAERRKRRRGSERRKGPRSRRLWQRLPSCTTRLRPWSSALLTACT | LWQRLPSCTTR | No | Alternative | Junction | 11 | 2 | ATG | TGA | NA |
chrY|1599191|1599432|+|1|circRNA|AKAP17A|ENSTR0000313871.7|4 | circAKAP17A(4) | AKAP17A | LEELERERKREEKLRKREQKQRDRELRRNQKKLEKLQAEEQKQLQEKIKLEERKLLLAQRNLQSIRLIAELLSRAKETKGAGRAGAREEKRREASQEGAEAEGP | EASQEGAEAEGP | No | Alternative | Junction | 12 | 2 | CTG | TGA | NA |
chrY|19043162|19044695|-|2|circRNA|TTTY14|ENST00000447937.1|6,5 | circTTTY14(6,5) | TTTY14 | MREARCARWTLGSSFVPASPRFQGSSLNKGNYCSSGGCEDVGDLRAEL | FQGSSLNKGNYCSSGGCEDVGDLR | No | Alternative | Alternative | 24 | 1 | ATG | TAG | NA |
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