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Long-Read CircRNA Encoded Peptides
Use criteria below to search among 994 circRNA peptides detected by long-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Short-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16|87830533|87830862|1|329|0 | circSLC7A5(NE) | SLC7A5 | LLPPPHASRIQGAGGLSTARTCLLAAAAVGEHGGCQRLLWKVAASEMAGAAGVRLHTAQVSSGRLSWGGSSSAEGWWGVQSVILGAVCPTPAWGPHFRR | LLAAAAVGEHGGCQR | No | Alternative | Junction | 15 | 2 | CTG | TAG | NA | No |
chr16|87830533|87830862|1|329|0 | circSLC7A5(NE) | SLC7A5 | LLPPPHASRIQGAGGLSTARTCLLAAAAVGEHGGCQRLLWKVAASEMAGAAGVRLHTAQVSSGRLSWGGSSSAEGWWGVQSVILGAVCPTPAWGPHFRR | VAASEMAGAAGVR | No | Alternative | Junction | 13 | 2 | CTG | TAG | NA | Yes |
chr16|87975047|87984259|2|53,84|0,9128 | circBANP(NE,S3) | BANP | LNSFVLTGQNKQHSPIQVPMVAGSPLGATQTCNKVRW | LNSFVLTGQNK | No | Alternative | Junction | 11 | 1 | TTG | TGA | TransCirc | Yes |
chr16|8942208|8942391|1|183|0 | circENST00000381886.8(NE) | ENST00000381886.8 | LARAGTRIPMLGLSQVRQTLHWASQSLRVSQYLPRTWMASCSLGGAPLACDKGGTDPTA | IPMLGLSQVR | No | Alternative | Junction | 10 | 3 | TTG | TGA | NA | Yes |
chr16|89670870|89671066|1|196|0 | circSPATA33(NE) | SPATA33 | LLNTMARDKLSPVTAPLQQPSAQARLSPCVENALPCVEA | LLNTMAR | No | Alternative | Junction | 7 | 2 | TTG | TGA | NA | No |
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