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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLC25A17-4:1 | OV | 25 | 0.255803 | noncoding | 36 | chr22 | 40738869 | 40744390 | - | 0.6321 | lnc-SLC25A17-4 | 0.916 | -1.772 | -5.447 | -2.664 | 1 | noncoding | -0.356371497 | RLIYTDDNALEFNIVSAMIYEHIWK | n[145]RLIYTDDNALEFNIVSAM[147]IYEHIWK | MRLIYTDDNALEFNIVSAMIYEHIWKRNRIRGQWFK |
lnc-SLC25A18-1:1 | BRCA-Luminal B | 16 | 0.708913 | coding | 39 | chr22 | 17418696 | 17419828 | + | 0.955 | lnc-SLC25A18-1 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.272833312 | LEVGAAIMMIPQLMEK | n[145]LEVGAAIM[147]MIPQLMEK | LEVGAAIMMIPQLMEKFNLDLSTVTQAFLKNSGELELES |
lnc-SLC16A3-2:1 | CCRC | 7 | 0.113314 | noncoding | 114 | chr17 | 82214226 | 82217352 | + | 0.9984 | lnc-SLC16A3-2 | 0.106 | -3.239 | 0 | -4.008 | 9 | noncoding | -0.261998108 | EAPLDRK | n[230]EAPLDRK | LPGSQVLRPERSQEMKGPGGCEWASVSGCSRRRGVGTDSCLRAGGREAPLDRKTLQEQTSKTGTVQMGPGAGQRRQTCPTAAVTTATSWRSRPGGRASAARDPGVDTGRTRGCS |
lnc-SLC16A3-2:1 | CCRC | 22 | 0.113314 | noncoding | 114 | chr17 | 82214226 | 82217352 | + | 0.0929 | lnc-SLC16A3-2 | 0.106 | -3.239 | 0 | -4.008 | 2 | noncoding | -0.261998108 | TLQEQTSKTGTVQMGPGAGQRR | n[230]TLQEQTSKTGTVQMGPGAGQRR | LPGSQVLRPERSQEMKGPGGCEWASVSGCSRRRGVGTDSCLRAGGREAPLDRKTLQEQTSKTGTVQMGPGAGQRRQTCPTAAVTTATSWRSRPGGRASAARDPGVDTGRTRGCS |
lnc-SLC16A3-2:1 | PRAD | 26 | 0.113314 | noncoding | 64 | chr17 | 82214226 | 82217352 | + | 0.8302 | lnc-SLC16A3-2 | 0.131 | 0 | 0 | 0 | 8 | noncoding | -0.261998108 | VGSMGTHVWAGHSAHTCEPSTLGGQR | VGSMGTHVWAGHSAHTCEPSTLGGQR | LLGLYPGSACLSVPACKVGSMGTHVWAGHSAHTCEPSTLGGQREDPLSSGDRVSLCCPGCSSAA |
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