top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-SLC16A3-2:1
Chromosome
chr17
Gene Name
lnc-SLC16A3-2
Start
82214226
CPC Label
noncoding
End
82217352
Cancer
CCRC
Strand
+
Peptide
EAPLDRK
Modified Peptide
n[230]EAPLDRK
Peptide Length
7
ORF Length
114
Open Reading Frame (ORF)
LPGSQVLRPERSQEMKGPGGCEWASVSGCSRRRGVGTDSCLRAGGREAPLDRKTLQEQTSKTGTVQMGPGAGQRRQTCPTAAVTTATSWRSRPGGRASAARDPGVDTGRTRGCS
Conservation Score
0.106
PhyloCSF Frame 1
-3.239
No. of Spectra
9
CPC Coding Probability
0.113314
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9984
PhyloCSF Frame 3
-4.008
CNTI Score
-0.261998108
bottom of page