top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLC1A1-9:1 | EOGC | 10 | 0.0335917 | noncoding | 59 | chr9 | 4474157 | 4476133 | + | 0.9974 | lnc-SLC1A1-9 | 0.77 | -5.311 | -4.72 | -3.682 | 16 | noncoding | -0.381783942 | FLSLVNLLNK | n[145]FLSLVNLLNK | MLFFVVLFVTAKYWKQTRFLSLVNLLNKLWIHPHSVVFCSSAKESGRFLYNKPTQRNIK |
lnc-SLC1A2-2:1 | OV | 17 | 0.114317 | noncoding | 53 | chr11 | 35132654 | 35138032 | - | 0.3347 | lnc-SLC1A2-2 | 0.027 | -4.358 | -6.397 | -5.629 | 1 | noncoding | -0.372547218 | GTMPGLLREGRVFGTEK | n[145]GTM[147]PGLLREGRVFGTEK | MKVIISGCGKMKGTMPGLLREGRVFGTEKSLSGSSPQPLRSWHAMTQRAARLE |
lnc-SLC1A2-2:1 | OV | 10 | 0.114317 | noncoding | 53 | chr11 | 35132654 | 35138032 | - | 0.7437 | lnc-SLC1A2-2 | 0.027 | -4.358 | -6.397 | -5.629 | 4 | noncoding | -0.372547218 | MKVIISGCGK | n[145]MKVIISGCGK | MKVIISGCGKMKGTMPGLLREGRVFGTEKSLSGSSPQPLRSWHAMTQRAARLE |
lnc-SLC1A2-2:1 | OV | 10 | 0.114317 | noncoding | 53 | chr11 | 35132654 | 35138032 | - | 0.7437 | lnc-SLC1A2-2 | 0.027 | -4.358 | -6.397 | -5.629 | 4 | noncoding | -0.372547218 | MKVIISGCGK | n[145]M[147]KVIISGCGK | MKVIISGCGKMKGTMPGLLREGRVFGTEKSLSGSSPQPLRSWHAMTQRAARLE |
lnc-SLC20A2-1:1 | OSCC | 20 | 0.160529 | noncoding | 48 | chr8 | 42560405 | 42568197 | - | 0.6294 | lnc-SLC20A2-1 | 0.388 | 0 | 0 | 0 | 1 | noncoding | -0.340529403 | MAAILLLLTFRPCIFNLLVK | n[145]MAAILLLLTFRPCIFNLLVK | MAAILLLLTFRPCIFNLLVKFVSSGIKAVKLQMVLQMEPQMSSTNNFY |
Page 1 of 1
bottom of page