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The Maher Lab

McDonnell Genome Institute

Washington University School of Medicine in St. Louis

PepTransDB

The Maher Lab | Washington University

LncRNA Peptides

CircRNA Peptides

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page.

Transcript*	Cancer	Peptide Length	CPC Coding Probability	CPC Label	ORF Length	Chromosome	Start	End	Strand	Max Probability	Gene Name	Conservation Score	PhyloCSF Frame 1	PhyloCSF Frame 2	PhyloCSF Frame 3	No. of Spectra	CNTI Index	CNTI Score	Peptide	Modified Peptide	ORF
lnc-SLC39A6-1:5	BRCA-HER2-enriched	16	0.446513	noncoding	63	chr18	36182661	36187450	-	0.9985	lnc-SLC39A6-1	0.377	-5.54	-4.535	-4.756	4	noncoding	-0.290839752	LSAQAALVQDAGIELK	n[145]LSAQAALVQDAGIELK	LSAQAALVQDAGIELKERKRLLPSKISREGSPKEEAFEVGHSSEPVKMGGGVGNVRNTGSLGL
lnc-SLC39A6-1:5	OSCC	14	0.446513	noncoding	48	chr18	36182661	36187450	-	0.925	lnc-SLC39A6-1	0.226	-4.13	-2.644	-3.109	18	noncoding	-0.290839752	LAPLGAFHQDSLGR	n[145]LAPLGAFHQDSLGR	LAPLGAFHQDSLGRSYQKETIRSQIARSHPALSRTSIPTKECLTWEEE
lnc-SLC3A2-6:1	OV	19	0.167612	noncoding	78	chr11	62840507	62841835	+	0.5754	lnc-SLC3A2-6	1	-3.443	-2.409	-2.017	2	noncoding	-0.400830539	ESAPFLEVLQYQVDAWSGR	n[145]ESAPFLEVLQYQVDAWSGR	LFSPRRESAPFLEVLQYQVDAWSGRSKLLFHLLFPKIHLIYCPRIEDVSDIKLIRTDTTLDLSQKAEKRYLYFGRLGG
lnc-SLC3A2-6:1	OV	8	0.167612	noncoding	78	chr11	62840507	62841835	+	0.4156	lnc-SLC3A2-6	1	-3.443	-2.409	-2.017	2	noncoding	-0.400830539	IEDVSDIK	n[145]IEDVSDIK	LFSPRRESAPFLEVLQYQVDAWSGRSKLLFHLLFPKIHLIYCPRIEDVSDIKLIRTDTTLDLSQKAEKRYLYFGRLGG
lnc-SLC3A2-6:1	OV	20	0.167612	noncoding	78	chr11	62840507	62841835	+	0.7463	lnc-SLC3A2-6	1	-3.443	-2.409	-2.017	1	noncoding	-0.400830539	RESAPFLEVLQYQVDAWSGR	n[145]RESAPFLEVLQYQVDAWSGR	LFSPRRESAPFLEVLQYQVDAWSGRSKLLFHLLFPKIHLIYCPRIEDVSDIKLIRTDTTLDLSQKAEKRYLYFGRLGG

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