top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-SLC3A2-6:1
Chromosome
chr11
Gene Name
lnc-SLC3A2-6
Start
62840507
CPC Label
noncoding
End
62841835
Cancer
OV
Strand
+
Peptide
ESAPFLEVLQYQVDAWSGR
Modified Peptide
n[145]ESAPFLEVLQYQVDAWSGR
Peptide Length
19
ORF Length
78
Open Reading Frame (ORF)
LFSPRRESAPFLEVLQYQVDAWSGRSKLLFHLLFPKIHLIYCPRIEDVSDIKLIRTDTTLDLSQKAEKRYLYFGRLGG
Conservation Score
1
PhyloCSF Frame 1
-3.443
No. of Spectra
2
CPC Coding Probability
0.167612
PhyloCSF Frame 2
-2.409
CNTI Index
noncoding
Max Probability
0.5754
PhyloCSF Frame 3
-2.017
CNTI Score
-0.400830539
bottom of page