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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SMARCAD1-1:1 | HCC | 7 | 0.0406478 | noncoding | 108 | chr4 | 94369832 | 94370163 | + | 0.979 | lnc-SMARCAD1-1 | 1 | -3.17 | -2.787 | -3.258 | 6 | noncoding | -0.439134051 | IEGVYSR | n[230]IEGVYSR | LEGCCPSHFAVYKRGLWNQREHTALLKIEGVYSRDEAEFYLSKRCVYVYKAKNNTVTPDGKPNKTRVIWGKVTLAHGNSGMVHAKFQSNLTAKAIGHRVRVMLHPSRI |
lnc-SLITRK6-7:1 | OV | 14 | 0.632031 | coding | 100 | chr13 | 84872031 | 84876391 | - | 0.8209 | lnc-SLITRK6-7 | 0.497 | 0 | 0 | 0 | 4 | noncoding | -0.333165968 | MVLSGIIGAMSNTK | n[145]MVLSGIIGAM[147]SNTK | MVLSGIIGAMSNTKIRSIPITLHLNSMLQIHNPISHPNYCLTEIINLICQFLIYLALGIPKLRRIFLPTIHKACSLNRRVQSNSSSSSSCNSYKAQDHSY |
lnc-SLITRK6-7:1 | OV | 14 | 0.632031 | coding | 100 | chr13 | 84872031 | 84876391 | - | 0.8209 | lnc-SLITRK6-7 | 0.497 | 0 | 0 | 0 | 4 | noncoding | -0.333165968 | MVLSGIIGAMSNTK | n[145]M[147]VLSGIIGAMSNTK | MVLSGIIGAMSNTKIRSIPITLHLNSMLQIHNPISHPNYCLTEIINLICQFLIYLALGIPKLRRIFLPTIHKACSLNRRVQSNSSSSSSCNSYKAQDHSY |
lnc-SLMAP-4:1 | BRCA-Luminal B | 9 | 0.474665 | noncoding | 129 | chr3 | 57941817 | 57942304 | + | 0.9999 | lnc-SLMAP-4 | 1 | 0 | 0 | 0 | 12 | noncoding | -0.34073101 | ISFELFADK | n[145]ISFELFADK | MVNPTMVFDIAVNDKPLGRISFELFADKFPKTTENFHALSTGEKRFGCKGSCFHRIIPGFVCQGGDFTCHTGGTSIYREKFDCKNFILKHIGPGILSMANAGPNTSGSQFSCALPRLSGWMASMWPLAW |
lnc-SLMAP-4:1 | BRCA-Luminal A | 9 | 0.474665 | noncoding | 129 | chr3 | 57941817 | 57942304 | + | 0.9999 | lnc-SLMAP-4 | 1 | 0 | 0 | 0 | 12 | noncoding | -0.34073101 | ISFELFADK | n[145]ISFELFADK | MVNPTMVFDIAVNDKPLGRISFELFADKFPKTTENFHALSTGEKRFGCKGSCFHRIIPGFVCQGGDFTCHTGGTSIYREKFDCKNFILKHIGPGILSMANAGPNTSGSQFSCALPRLSGWMASMWPLAW |
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