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McDonnell Genome Institute
Washington University
Transcript
lnc-SMARCAD1-1:1
Chromosome
chr4
Gene Name
lnc-SMARCAD1-1
Start
94369832
CPC Label
noncoding
End
94370163
Cancer
HCC
Strand
+
Peptide
AKNNTVTPDGKPNK
Modified Peptide
AKNNTVTPDGKPNK
Peptide Length
14
ORF Length
108
Open Reading Frame (ORF)
LEGCCPSHFAVYKRGLWNQREHTALLKIEGVYSRDEAEFYLSKRCVYVYKAKNNTVTPDGKPNKTRVIWGKVTLAHGNSGMVHAKFQSNLTAKAIGHRVRVMLHPSRI
Conservation Score
1
PhyloCSF Frame 1
-3.17
No. of Spectra
1
CPC Coding Probability
0.0406478
PhyloCSF Frame 2
-2.787
CNTI Index
noncoding
Max Probability
0.1619
PhyloCSF Frame 3
-3.258
CNTI Score
-0.439134051
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