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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SNAI1-3:1 | OSCC | 12 | 0.0115794 | noncoding | 40 | chr20 | 50078877 | 50093698 | + | 0.9965 | lnc-SNAI1-3 | 0.269 | -4.735 | -4.474 | -5.087 | 8 | noncoding | -0.429211667 | VTQQIAHVLIMK | n[145]VTQQIAHVLIM[147]K | MSYSSALFRCFNNYVDIRVTQQIAHVLIMKDWSQEASTHR |
lnc-SNAI1-3:1 | OV | 17 | 0.0115794 | noncoding | 40 | chr20 | 50078877 | 50093698 | + | 0.0589 | lnc-SNAI1-3 | 0.269 | -4.735 | -4.474 | -5.087 | 1 | noncoding | -0.429211667 | SYSSALFRCFNNYVDIR | n[145]SYSSALFRCFNNYVDIR | MSYSSALFRCFNNYVDIRVTQQIAHVLIMKDWSQEASTHR |
lnc-SNAI1-3:1 | OV | 12 | 0.0115794 | noncoding | 40 | chr20 | 50078877 | 50093698 | + | 0.9912 | lnc-SNAI1-3 | 0.269 | -4.735 | -4.474 | -5.087 | 24 | noncoding | -0.429211667 | VTQQIAHVLIMK | n[145]VTQQIAHVLIM[147]K | MSYSSALFRCFNNYVDIRVTQQIAHVLIMKDWSQEASTHR |
lnc-SNAI1-3:1 | OV | 12 | 0.0115794 | noncoding | 40 | chr20 | 50078877 | 50093698 | + | 0.9912 | lnc-SNAI1-3 | 0.269 | -4.735 | -4.474 | -5.087 | 24 | noncoding | -0.429211667 | VTQQIAHVLIMK | n[145]VTQQIAHVLIMK | MSYSSALFRCFNNYVDIRVTQQIAHVLIMKDWSQEASTHR |
lnc-SNAI1-5:2 | OV | 17 | 0.153928 | noncoding | 109 | chr20 | 50030215 | 50034271 | + | 0.5715 | lnc-SNAI1-5 | 0.915 | 0 | -4.032 | 0 | 1 | noncoding | -0.334694383 | SSWGVGPAGWPWIGGTR | n[145]SSWGVGPAGWPWIGGTR | MTVLSRVGKELREGGTQISRGQEKHSRQREQQVQRPEAGMCLVCSRTGQEASVAAKGSSREDGVCGDMAWRRLKPGGREQEGQSSPRSSWGVGPAGWPWIGGTRVSVCL |
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