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McDonnell Genome Institute
Washington University
Transcript
lnc-SNAI1-3:1
Chromosome
chr20
Gene Name
lnc-SNAI1-3
Start
50078877
CPC Label
noncoding
End
50093698
Cancer
BRCA-Luminal B
Strand
+
Peptide
VTQQIAHVLIMK
Modified Peptide
n[145]VTQQIAHVLIMK
Peptide Length
12
ORF Length
40
Open Reading Frame (ORF)
MSYSSALFRCFNNYVDIRVTQQIAHVLIMKDWSQEASTHR
Conservation Score
0.269
PhyloCSF Frame 1
-4.735
No. of Spectra
33
CPC Coding Probability
0.0115794
PhyloCSF Frame 2
-4.474
CNTI Index
noncoding
Max Probability
0.9969
PhyloCSF Frame 3
-5.087
CNTI Score
-0.429211667
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