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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SPANXC-1:1 | CCRC | 24 | 0.236597 | noncoding | 114 | chrX | 141261118 | 141264213 | - | 0.2098 | lnc-SPANXC-1 | 1 | 0 | 0 | 0 | 1 | coding | 0.660193108 | DSVSSAMKARGAQFWPLTILMGSR | n[230]DSVSSAM[147]KARGAQFWPLTILM[147]GSR | LNEREVQLGVADKMSWPSEYKDSAWIFLGGLPYELTEGDIICVFSQYGRLLTSISCGTRRLGNPKDSVSSAMKARGAQFWPLTILMGSRSKEELSEWIMCLTIGLLRTQKKWIM |
lnc-SORCS2-4:1 | BRCA-Luminal A | 9 | 0.96916 | coding | 37 | chr4 | 7939000 | 7940295 | + | 0.9985 | lnc-SORCS2-4 | 0.996 | -6.077 | -3.434 | -3.569 | 60 | noncoding | -0.246307735 | ARERLALQK | n[145]ARERLALQK | LESALQDALISNPELRLLGQRARERLALQKGKLRSKE |
lnc-SORCS2-4:1 | BRCA-Basal-like | 9 | 0.96916 | coding | 37 | chr4 | 7939000 | 7940295 | + | 0.9985 | lnc-SORCS2-4 | 0.996 | -6.077 | -3.434 | -3.569 | 60 | noncoding | -0.246307735 | ARERLALQK | n[145]ARERLALQK | LESALQDALISNPELRLLGQRARERLALQKGKLRSKE |
lnc-SORCS2-4:1 | OV | 9 | 0.96916 | coding | 37 | chr4 | 7939000 | 7940295 | + | 0.9935 | lnc-SORCS2-4 | 0.996 | -6.077 | -3.434 | -3.569 | 24 | noncoding | -0.246307735 | ARERLALQK | n[145]ARERLALQK | LESALQDALISNPELRLLGQRARERLALQKGKLRSKE |
lnc-SORCS3-5:4 | EOGC | 17 | 0.0759907 | noncoding | 37 | chr10 | 106163347 | 106188620 | + | 0.5725 | lnc-SORCS3-5 | 1 | -5.648 | -4.914 | -2.971 | 1 | noncoding | -0.42537346 | SMLPSPVFRYTWLLSEK | n[145]SM[147]LPSPVFRYTWLLSEK | LKIQAKSMLPSPVFRYTWLLSEKMETIFTQQHQLRFL |
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