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McDonnell Genome Institute
Washington University
Transcript
lnc-SPANXC-1:1
Chromosome
chrX
Gene Name
lnc-SPANXC-1
Start
141261118
CPC Label
noncoding
End
141264213
Cancer
CCRC
Strand
-
Peptide
GAQFWPLTILMGSRSK
Modified Peptide
n[230]GAQFWPLTILM[147]GSRSK
Peptide Length
16
ORF Length
114
Open Reading Frame (ORF)
LNEREVQLGVADKMSWPSEYKDSAWIFLGGLPYELTEGDIICVFSQYGRLLTSISCGTRRLGNPKDSVSSAMKARGAQFWPLTILMGSRSKEELSEWIMCLTIGLLRTQKKWIM
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
5
CPC Coding Probability
0.236597
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.6276
PhyloCSF Frame 3
0
CNTI Score
0.660193108
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