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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SPANXA2-1:1 | BRCA-Luminal B | 15 | 0.986767 | coding | 151 | chrX | 141625863 | 141626733 | + | 0.142 | lnc-SPANXA2-1 | 0.213 | 0 | 0 | 0 | 1 | noncoding | -0.307343194 | TTCEAKEGETDELLK | n[145]TTCEAKEGETDELLK | MAEFSEEEEDTVRYCCSTIEDVPEEIKEAIAYFCSKMAEINKEPEGNIGHHCYIIPKVTEEVGEASSDMPEPSTSTSQENPSMKWRKKTTCEAKEGETDELLKAAKKIRSFVQQNSERRKAGKKSTVLIFYYHSNKKRDENQPNEDEDSHE |
lnc-SPANXA2-1:1 | BRCA-Luminal B | 14 | 0.986767 | coding | 151 | chrX | 141625863 | 141626733 | + | 0.3252 | lnc-SPANXA2-1 | 0.213 | 0 | 0 | 0 | 1 | noncoding | -0.307343194 | YCCSTIEDVPEEIK | n[145]YCCSTIEDVPEEIK | MAEFSEEEEDTVRYCCSTIEDVPEEIKEAIAYFCSKMAEINKEPEGNIGHHCYIIPKVTEEVGEASSDMPEPSTSTSQENPSMKWRKKTTCEAKEGETDELLKAAKKIRSFVQQNSERRKAGKKSTVLIFYYHSNKKRDENQPNEDEDSHE |
lnc-SPANXB1-3:1 | BRCA-Basal-like | 18 | 0.2644 | noncoding | 89 | chrX | 141138477 | 141139174 | + | 0.8569 | lnc-SPANXB1-3 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.357168443 | ESDIMTGSRVAMVPAQGK | n[145]ESDIMTGSRVAM[147]VPAQGK | MPRESDIMTGSRVAMVPAQGKRCYDRKQSGYGGQTKPIFWKKAKTTKKIVLRLECVEPNCRSKRTLAIKRCKHFELGGDKKRKGQVIQF |
lnc-SPANXB1-3:1 | EOGC | 18 | 0.2644 | noncoding | 89 | chrX | 141138477 | 141139174 | + | 0.4012 | lnc-SPANXB1-3 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.357168443 | ESDIMTGSRVAMVPAQGK | n[145]ESDIMTGSRVAMVPAQGK | MPRESDIMTGSRVAMVPAQGKRCYDRKQSGYGGQTKPIFWKKAKTTKKIVLRLECVEPNCRSKRTLAIKRCKHFELGGDKKRKGQVIQF |
lnc-SPANXB1-3:1 | EOGC | 10 | 0.2644 | noncoding | 89 | chrX | 141138477 | 141139174 | + | 0.2235 | lnc-SPANXB1-3 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.357168443 | VAMVPAQGKR | n[145]VAM[147]VPAQGKR | MPRESDIMTGSRVAMVPAQGKRCYDRKQSGYGGQTKPIFWKKAKTTKKIVLRLECVEPNCRSKRTLAIKRCKHFELGGDKKRKGQVIQF |
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