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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SPRY1-11:10 | OSCC | 8 | 0.0407877 | noncoding | 64 | chr4 | 123524686 | 123527843 | + | 0.3036 | lnc-SPRY1-11 | 0.129 | -4.724 | -2.713 | -4.278 | 1 | noncoding | -0.392133102 | TGLECQSK | n[145]TGLECQSK | MLLKGLLSLHEFLIKPKSYPIGAENRSNTILDVTLGSTHTWESTKTGLECQSKKWITLAGRGGS |
lnc-SPRY1-11:10 | OSCC | 16 | 0.0407877 | noncoding | 64 | chr4 | 123524686 | 123527843 | + | 0.9037 | lnc-SPRY1-11 | 0.129 | -4.724 | -2.713 | -4.278 | 10 | noncoding | -0.392133102 | TGLECQSKKWITLAGR | n[145]TGLECQSKKWITLAGR | MLLKGLLSLHEFLIKPKSYPIGAENRSNTILDVTLGSTHTWESTKTGLECQSKKWITLAGRGGS |
lnc-SPRY1-11:12 | BRCA-HER2-enriched | 8 | 0.045908 | noncoding | 41 | chr4 | 123639550 | 123962665 | + | 0.1701 | lnc-SPRY1-11 | 0.349 | -5.298 | -5.543 | -5.172 | 1 | noncoding | -0.366446437 | FNEIEKKR | n[145]FNEIEKKR | LRSSCCLHGIPILGKFNEIEKKRVESSRPFFFINFFKNITL |
lnc-SPRY1-11:34 | CRC | 10 | 0.28123 | noncoding | 98 | chr4 | 123709457 | 123716405 | + | 0.629 | lnc-SPRY1-11 | 0.432 | 0 | 0 | 0 | 1 | noncoding | -0.400723519 | LTGWLDPEDR | LMLSGKCHLLAGGHQDNVQTTPSTSPEPGRLTGWLDPEDRQQSLQFGSQEATSLGKGGEYYIKGIPHGTKESEPQPLALDLPSDRAYPNEKETENQRW | |
lnc-SPRY1-11:6 | BRCA-Basal-like | 13 | 0.0238179 | noncoding | 77 | chr4 | 123505268 | 123508088 | + | 0.969 | lnc-SPRY1-11 | 1 | -3.056 | 0.499 | -0.833 | 15 | noncoding | -0.316017238 | LSLCSQAERSTGR | n[145]LSLCSQAERSTGR | LSLCSQAERSTGRKEEGALCAAIVWATGLKQPSDYLIYKVHLNPSQILSVWSGGTQTGTDGAEPLCLRIWKYAFSFT |
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