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McDonnell Genome Institute
Washington University
Transcript
lnc-SPRY1-11:6
Chromosome
chr4
Gene Name
lnc-SPRY1-11
Start
123505268
CPC Label
noncoding
End
123508088
Cancer
BRCA-Basal-like
Strand
+
Peptide
LSLCSQAERSTGR
Modified Peptide
n[145]LSLCSQAERSTGR
Peptide Length
13
ORF Length
77
Open Reading Frame (ORF)
LSLCSQAERSTGRKEEGALCAAIVWATGLKQPSDYLIYKVHLNPSQILSVWSGGTQTGTDGAEPLCLRIWKYAFSFT
Conservation Score
1
PhyloCSF Frame 1
-3.056
No. of Spectra
15
CPC Coding Probability
0.0238179
PhyloCSF Frame 2
0.499
CNTI Index
noncoding
Max Probability
0.969
PhyloCSF Frame 3
-0.833
CNTI Score
-0.316017238
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