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The Maher Lab

McDonnell Genome Institute

Washington University School of Medicine in St. Louis

PepTransDB

The Maher Lab | Washington University

LncRNA Peptides

CircRNA Peptides

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page.

Transcript*	Cancer	Peptide Length	CPC Coding Probability	CPC Label	ORF Length	Chromosome	Start	End	Strand	Max Probability	Gene Name	Conservation Score	PhyloCSF Frame 1	PhyloCSF Frame 2	PhyloCSF Frame 3	No. of Spectra	CNTI Index	CNTI Score	Peptide	Modified Peptide	ORF
lnc-SRSF6-3:1	OV	19	0.157629	noncoding	58	chr20	42685482	42687645	+	0.143	lnc-SRSF6-3	1	-4.818	-5.304	-3.451	1	noncoding	-0.411964599	VNILEEPSFPCLLIRSPQK	n[145]VNILEEPSFPCLLIRSPQK	MKFYDLQHSVCPGSPLSPKTSTFSRLLFAGPLPKIKSRVNILEEPSFPCLLIRSPQKA
lnc-SRSF6-3:3	OV	9	0.133463	noncoding	56	chr20	42685482	42688562	+	0.8559	lnc-SRSF6-3	0.918	-4.823	-5.049	-2.712	3	noncoding	-0.389727923	LDSKALESK	n[145]LDSKALESK	LDSKALESKAMLQEHLVPGQHGFTNGHPSLPSPTSAKQPCYEEWGERNSCLIQFGS
lnc-SS18-6:1	BRCA-Luminal B	11	0.0691125	noncoding	80	chr18	25333247	25334104	-	0.9977	lnc-SS18-6	0.089	-5.43	-5.8	-5.022	4	noncoding	-0.379154466	MSPGPSAHPLR	n[145]M[147]SPGPSAHPLR	MVFQRQDVLFFWVVLAKCKVSNVLDFKKIQTATAELTRLFSLLFSFKSKMSPGPSAHPLRICSLRVYIYIYICVYIYIYI
lnc-SS18-6:1	BRCA-Luminal A	11	0.0691125	noncoding	80	chr18	25333247	25334104	-	0.9977	lnc-SS18-6	0.089	-5.43	-5.8	-5.022	4	noncoding	-0.379154466	MSPGPSAHPLR	n[145]M[147]SPGPSAHPLR	MVFQRQDVLFFWVVLAKCKVSNVLDFKKIQTATAELTRLFSLLFSFKSKMSPGPSAHPLRICSLRVYIYIYICVYIYIYI
lnc-SS18-6:1	BRCA-Basal-like	11	0.0691125	noncoding	80	chr18	25333247	25334104	-	0.9977	lnc-SS18-6	0.089	-5.43	-5.8	-5.022	4	noncoding	-0.379154466	MSPGPSAHPLR	n[145]M[147]SPGPSAHPLR	MVFQRQDVLFFWVVLAKCKVSNVLDFKKIQTATAELTRLFSLLFSFKSKMSPGPSAHPLRICSLRVYIYIYICVYIYIYI

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