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McDonnell Genome Institute
Washington University
Transcript
lnc-SS18-6:1
Chromosome
chr18
Gene Name
lnc-SS18-6
Start
25333247
CPC Label
noncoding
End
25334104
Cancer
BRCA-Luminal B
Strand
-
Peptide
MSPGPSAHPLR
Modified Peptide
n[145]M[147]SPGPSAHPLR
Peptide Length
11
ORF Length
80
Open Reading Frame (ORF)
MVFQRQDVLFFWVVLAKCKVSNVLDFKKIQTATAELTRLFSLLFSFKSKMSPGPSAHPLRICSLRVYIYIYICVYIYIYI
Conservation Score
0.089
PhyloCSF Frame 1
-5.43
No. of Spectra
4
CPC Coding Probability
0.0691125
PhyloCSF Frame 2
-5.8
CNTI Index
noncoding
Max Probability
0.9977
PhyloCSF Frame 3
-5.022
CNTI Score
-0.379154466
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