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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SSR3-11:1 | OV | 17 | 0.245649 | noncoding | 225 | chr3 | 156809591 | 156810705 | - | 1 | lnc-SSR3-11 | 1 | 0 | 0 | 0 | 20 | coding | 0.759038619 | LVKPGNQNTQVTQAWNK | n[145]LVKPGNQNTQVTQAWNK | LVKPGNQNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIHKVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLRAFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPDLCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAEN |
lnc-SSR3-11:1 | OV | 19 | 0.245649 | noncoding | 225 | chr3 | 156809591 | 156810705 | - | 0.9998 | lnc-SSR3-11 | 1 | 0 | 0 | 0 | 7 | coding | 0.759038619 | VAHSFNCTPVEGMLSHQLK | n[145]VAHSFNCTPVEGM[147]LSHQLK | LVKPGNQNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIHKVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLRAFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPDLCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAEN |
lnc-SSR3-7:1 | OV | 13 | 0.113 | noncoding | 53 | chr3 | 156641441 | 156665963 | - | 0.8946 | lnc-SSR3-7 | 0.126 | -3.843 | -5.798 | -5.191 | 4 | noncoding | -0.34964737 | LLQVVAGHASSEK | n[145]LLQVVAGHASSEK | LLQVVAGHASSEKNGHDLCLRVAYGRRRINSNNHSNQLTTVNFNKCFGRSLSW |
lnc-SSR4-2:1 | EOGC | 12 | 0.131198 | noncoding | 105 | chrX | 153841250 | 153841565 | + | 0.0587 | lnc-SSR4-2 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.326488232 | KEERADSIAFLK | n[145]KEERADSIAFLK | MGDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLQGLFGRKTGQAAGYSYTVASKNKGITWGEDTLMEYLENPKKHIPETKMIFVGIKKKEERADSIAFLKKATNE |
lnc-SSR4-2:1 | EOGC | 14 | 0.131198 | noncoding | 105 | chrX | 153841250 | 153841565 | + | 0.1419 | lnc-SSR4-2 | 1 | 0 | 0 | 0 | 3 | noncoding | -0.326488232 | TGQAAGYSYTVASK | n[145]TGQAAGYSYTVASK | MGDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLQGLFGRKTGQAAGYSYTVASKNKGITWGEDTLMEYLENPKKHIPETKMIFVGIKKKEERADSIAFLKKATNE |
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