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McDonnell Genome Institute
Washington University
Transcript
lnc-SSR3-11:1
Chromosome
chr3
Gene Name
lnc-SSR3-11
Start
156809591
CPC Label
noncoding
End
156810705
Cancer
BRCA-Basal-like
Strand
-
Peptide
VAHSFNCTPVEGMLSHQLK
Modified Peptide
n[145]VAHSFNCTPVEGM[147]LSHQLK
Peptide Length
19
ORF Length
225
Open Reading Frame (ORF)
LVKPGNQNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIHKVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLRAFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPDLCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAEN
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.245649
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.9992
PhyloCSF Frame 3
0
CNTI Score
0.759038619
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