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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SSR3-11:1 | EOGC | 17 | 0.245649 | noncoding | 225 | chr3 | 156809591 | 156810705 | - | 1 | lnc-SSR3-11 | 1 | 0 | 0 | 0 | 51 | coding | 0.759038619 | LVKPGNQNTQVTQAWNK | n[145]LVKPGNQNTQVTQAWNK | LVKPGNQNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIHKVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLRAFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPDLCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAEN |
lnc-SSR3-11:1 | EOGC | 8 | 0.245649 | noncoding | 100 | chr3 | 156809591 | 156810705 | - | 0.8757 | lnc-SSR3-11 | 1 | 0 | 0 | 0 | 19 | coding | 0.759038619 | SNQDYILK | n[145]SNQDYILK | LVEASSSGVSVLSLCEKGDAVIMEETGKIFKKEKEMKKGIAFPTSISVNNCVCHFSPLKSNQDYILKEGDLVKIELGVHVDGFIANVAHTFVVDVAQGTK |
lnc-SSR3-11:1 | EOGC | 19 | 0.245649 | noncoding | 225 | chr3 | 156809591 | 156810705 | - | 1 | lnc-SSR3-11 | 1 | 0 | 0 | 0 | 55 | coding | 0.759038619 | VAHSFNCTPVEGMLSHQLK | n[145]VAHSFNCTPVEGM[147]LSHQLK | LVKPGNQNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIHKVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLRAFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPDLCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAEN |
lnc-SSR3-11:1 | HCC | 9 | 0.245649 | noncoding | 225 | chr3 | 156809591 | 156810705 | - | 0.5894 | lnc-SSR3-11 | 1 | 0 | 0 | 0 | 1 | coding | 0.759038619 | ALLQSSTSR | n[230]ALLQSSTSR | LVKPGNQNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIHKVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLRAFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPDLCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAEN |
lnc-SSR3-11:1 | HCC | 19 | 0.245649 | noncoding | 225 | chr3 | 156809591 | 156810705 | - | 1 | lnc-SSR3-11 | 1 | 0 | 0 | 0 | 14 | coding | 0.759038619 | VAHSFNCTPVEGMLSHQLK | n[230]VAHSFNCTPVEGM[147]LSHQLK | LVKPGNQNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIHKVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLRAFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPDLCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAEN |
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