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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SSPO-1:1 | OV | 8 | 0.145677 | noncoding | 306 | chr7 | 149773207 | 149776041 | + | 0.9723 | lnc-SSPO-1 | 1 | 0 | 0 | 0 | 7 | noncoding | -0.303652591 | LLGGLLAR | n[145]LLGGLLAR | LRGRVPREGARGRGGRSRGKVERERVGGWRGGVGGTRRGRVGGEPASRALPSLSRRCQPGVQRRAPAGGRPGGSVWETPAPPPFSTRIPPRSTQTRSPSPGVPRTRFETSRGSRGGRRERGLGPCACENGSFEVETGERTLSQVPWEKAGPGRELQGARLGRGWAEILRAGSGGGSGRGLQRGEGSMGGRRLLGGLLARTPPGVRCGGQPSALSPQPQLLRGLHSPSLPRLRGFSLALFPLRPLLKAPEMLKSGLLVPGLLSMNFLQTPGFQLPPFCPFTGKGDCNSGLFPIPVLPDQPRFESRAE |
lnc-SSPO-1:1 | OV | 8 | 0.145677 | noncoding | 306 | chr7 | 149773207 | 149776041 | + | 0.76 | lnc-SSPO-1 | 1 | 0 | 0 | 0 | 7 | noncoding | -0.303652591 | SPSPGVPR | n[145]SPSPGVPR | LRGRVPREGARGRGGRSRGKVERERVGGWRGGVGGTRRGRVGGEPASRALPSLSRRCQPGVQRRAPAGGRPGGSVWETPAPPPFSTRIPPRSTQTRSPSPGVPRTRFETSRGSRGGRRERGLGPCACENGSFEVETGERTLSQVPWEKAGPGRELQGARLGRGWAEILRAGSGGGSGRGLQRGEGSMGGRRLLGGLLARTPPGVRCGGQPSALSPQPQLLRGLHSPSLPRLRGFSLALFPLRPLLKAPEMLKSGLLVPGLLSMNFLQTPGFQLPPFCPFTGKGDCNSGLFPIPVLPDQPRFESRAE |
lnc-SSR1-2:1 | OV | 7 | 0.120262 | noncoding | 38 | chr6 | 6938601 | 6938897 | - | 0.8356 | lnc-SSR1-2 | 0.065 | 0 | 0 | 0 | 2 | noncoding | -0.417323221 | LAQVEMK | n[145]LAQVEM[147]K | LAQVEMKRVRTPVLISSGITPVYSHCTPARATGDSIFF |
lnc-SSR3-11:1 | BRCA-Basal-like | 19 | 0.245649 | noncoding | 225 | chr3 | 156809591 | 156810705 | - | 0.9992 | lnc-SSR3-11 | 1 | 0 | 0 | 0 | 1 | coding | 0.759038619 | VAHSFNCTPVEGMLSHQLK | n[145]VAHSFNCTPVEGM[147]LSHQLK | LVKPGNQNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIHKVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLRAFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPDLCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAEN |
lnc-SSR3-11:1 | CCRC | 12 | 0.245649 | noncoding | 225 | chr3 | 156809591 | 156810705 | - | 0.2055 | lnc-SSR3-11 | 1 | 0 | 0 | 0 | 1 | coding | 0.759038619 | ITSGPFEPDLCK | n[230]ITSGPFEPDLCK | LVKPGNQNTQVTQAWNKVAHSFNCTPVEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFDIHKVYAVDVLVSSGEGKPKDAGQRTTIYKQDPSKQYGLKMKTSRAFFSEVETRFDAMPFTLRAFEDEKKAQMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPSGPMRITSGPFEPDLCKSEMEVQDAELKALLQSSTSRKTQKKKTKKASKTAEN |
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