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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-STPG1-2:1 | OSCC | 16 | 0.156289 | noncoding | 97 | chr1 | 24411189 | 24428500 | - | 0.9949 | lnc-STPG1-2 | 0.171 | -4.971 | -4.49 | -2.73 | 1 | coding | 0.671020504 | KSWEASVPGSGWTPKT | n[145]KSWEASVPGSGWTPKT | MSSAWDARGDPPASGCLRNSRAELGGAPRAGRSHHGSCPCVGACPRCFHPKSGDNWGLPAPPSSCQGRGRPTLLAQAPRVRKSWEASVPGSGWTPKT |
lnc-STPG1-2:1 | OV | 15 | 0.156289 | noncoding | 97 | chr1 | 24411189 | 24428500 | - | 0.0565 | lnc-STPG1-2 | 0.171 | -4.971 | -4.49 | -2.73 | 1 | coding | 0.671020504 | KSWEASVPGSGWTPK | n[145]KSWEASVPGSGWTPK | MSSAWDARGDPPASGCLRNSRAELGGAPRAGRSHHGSCPCVGACPRCFHPKSGDNWGLPAPPSSCQGRGRPTLLAQAPRVRKSWEASVPGSGWTPKT |
lnc-STPG1-2:1 | OV | 16 | 0.156289 | noncoding | 97 | chr1 | 24411189 | 24428500 | - | 0.9996 | lnc-STPG1-2 | 0.171 | -4.971 | -4.49 | -2.73 | 43 | coding | 0.671020504 | KSWEASVPGSGWTPKT | n[145]KSWEASVPGSGWTPKT | MSSAWDARGDPPASGCLRNSRAELGGAPRAGRSHHGSCPCVGACPRCFHPKSGDNWGLPAPPSSCQGRGRPTLLAQAPRVRKSWEASVPGSGWTPKT |
lnc-STPG2-3:1 | CCRC | 16 | 0.0948156 | noncoding | 33 | chr4 | 98256533 | 98261155 | - | 0.0742 | lnc-STPG2-3 | 0.011 | 0 | 0 | 0 | 1 | noncoding | -0.29224901 | MPVIPALWEAEAGGLR | n[230]MPVIPALWEAEAGGLR | MPVIPALWEAEAGGLRGQEIETILANMVKPRLY |
lnc-STPG2-3:2 | OV | 17 | 0.0971902 | noncoding | 124 | chr4 | 98256533 | 98261155 | - | 0.6176 | lnc-STPG2-3 | 0.986 | 0 | 0 | 0 | 2 | coding | 0.680744305 | LHHCTPAWATEQDPVSK | n[145]LHHCTPAWATEQDPVSK | LRQENRLNPGGGGCSELRLHHCTPAWATEQDPVSKKIKIKKKNPGGVHNSTHNTPMQTPPSGPLTAPTSAMLHINFITPPEDQPGPLHCCSSFFVHLSLTLINLFQIVKLTCFIFPTSLSNYIL |
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