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McDonnell Genome Institute
Washington University
Transcript
lnc-STPG1-2:1
Chromosome
chr1
Gene Name
lnc-STPG1-2
Start
24411189
CPC Label
noncoding
End
24428500
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
KSWEASVPGSGWTPK
Modified Peptide
n[145]KSWEASVPGSGWTPK
Peptide Length
15
ORF Length
97
Open Reading Frame (ORF)
MSSAWDARGDPPASGCLRNSRAELGGAPRAGRSHHGSCPCVGACPRCFHPKSGDNWGLPAPPSSCQGRGRPTLLAQAPRVRKSWEASVPGSGWTPKT
Conservation Score
0.171
PhyloCSF Frame 1
-4.971
No. of Spectra
5
CPC Coding Probability
0.156289
PhyloCSF Frame 2
-4.49
CNTI Index
coding
Max Probability
0.7784
PhyloCSF Frame 3
-2.73
CNTI Score
0.671020504
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