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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-STOX2-6:1 | OV | 12 | 0.544396 | coding | 59 | chr4 | 184256296 | 184260518 | + | 0.7278 | lnc-STOX2-6 | 0.345 | 0 | 0 | 0 | 1 | noncoding | -0.325510465 | MQSGLSDLCPGR | n[145]MQSGLSDLCPGR | MSKFWLWKEGRREGVGVGRGVVMLPCDGSGDLNVPEERVRMQSGLSDLCPGRTLLPSGV |
lnc-STPG1-2:1 | BRCA-HER2-enriched | 15 | 0.156289 | noncoding | 97 | chr1 | 24411189 | 24428500 | - | 0.7784 | lnc-STPG1-2 | 0.171 | -4.971 | -4.49 | -2.73 | 5 | coding | 0.671020504 | KSWEASVPGSGWTPK | n[145]KSWEASVPGSGWTPK | MSSAWDARGDPPASGCLRNSRAELGGAPRAGRSHHGSCPCVGACPRCFHPKSGDNWGLPAPPSSCQGRGRPTLLAQAPRVRKSWEASVPGSGWTPKT |
lnc-STPG1-2:1 | BRCA-Luminal A | 15 | 0.156289 | noncoding | 97 | chr1 | 24411189 | 24428500 | - | 0.7784 | lnc-STPG1-2 | 0.171 | -4.971 | -4.49 | -2.73 | 5 | coding | 0.671020504 | KSWEASVPGSGWTPK | n[145]KSWEASVPGSGWTPK | MSSAWDARGDPPASGCLRNSRAELGGAPRAGRSHHGSCPCVGACPRCFHPKSGDNWGLPAPPSSCQGRGRPTLLAQAPRVRKSWEASVPGSGWTPKT |
lnc-STPG1-2:1 | BRCA-Luminal B | 15 | 0.156289 | noncoding | 97 | chr1 | 24411189 | 24428500 | - | 0.7784 | lnc-STPG1-2 | 0.171 | -4.971 | -4.49 | -2.73 | 5 | coding | 0.671020504 | KSWEASVPGSGWTPK | n[145]KSWEASVPGSGWTPK | MSSAWDARGDPPASGCLRNSRAELGGAPRAGRSHHGSCPCVGACPRCFHPKSGDNWGLPAPPSSCQGRGRPTLLAQAPRVRKSWEASVPGSGWTPKT |
lnc-STPG1-2:1 | BRCA-Basal-like | 15 | 0.156289 | noncoding | 97 | chr1 | 24411189 | 24428500 | - | 0.7784 | lnc-STPG1-2 | 0.171 | -4.971 | -4.49 | -2.73 | 5 | coding | 0.671020504 | KSWEASVPGSGWTPK | n[145]KSWEASVPGSGWTPK | MSSAWDARGDPPASGCLRNSRAELGGAPRAGRSHHGSCPCVGACPRCFHPKSGDNWGLPAPPSSCQGRGRPTLLAQAPRVRKSWEASVPGSGWTPKT |
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