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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TOP2A-1:1 | OV | 15 | 0.160318 | noncoding | 56 | chr17 | 40439466 | 40439917 | - | 0.9697 | lnc-TOP2A-1 | 1 | 0 | 0 | 0 | 6 | coding | 0.707813527 | KIEDNNTLVFIVNVK | n[145]KIEDNNTLVFIVNVK | LRLRRQPKYPQKSAPRRNKLDHYAITKFPLTTESAMKKIEDNNTLVFIVNVKANKH |
lnc-TOP2B-2:1 | OV | 14 | 0.185797 | noncoding | 51 | chr3 | 25570960 | 25572503 | - | 0.8861 | lnc-TOP2B-2 | 0.024 | -4.054 | -3.452 | -4.846 | 6 | noncoding | -0.290162638 | YHQHPSALHPMLTK | n[145]YHQHPSALHPMLTK | LRSHLGLCWPQIPWAPLWACSWSPLLCYRYHQHPSALHPMLTKNCSKAPPL |
lnc-TOP3A-1:1 | BRCA-Luminal A | 16 | 0.988187 | coding | 119 | chr17 | 18119167 | 18357257 | - | 0.9813 | lnc-TOP3A-1 | 1 | -1.52 | -4.19 | 0.042 | 12 | noncoding | -0.217427831 | EAPVTTHLSQGPPSIR | n[145]EAPVTTHLSQGPPSIR | LREAPVTTHLSQGPPSIRLEFHLECGSQAWAGHPSEGLPTLHPSWGSRRTPGSVFPLCNEESGSLDPEPLTLTYSRILQPRGLQRAAKTLRKQEALIWGRVSRRQEELQRPGCAVEQDG |
lnc-TOP3A-1:1 | BRCA-HER2-enriched | 16 | 0.988187 | coding | 119 | chr17 | 18119167 | 18357257 | - | 0.9813 | lnc-TOP3A-1 | 1 | -1.52 | -4.19 | 0.042 | 12 | noncoding | -0.217427831 | EAPVTTHLSQGPPSIR | n[145]EAPVTTHLSQGPPSIR | LREAPVTTHLSQGPPSIRLEFHLECGSQAWAGHPSEGLPTLHPSWGSRRTPGSVFPLCNEESGSLDPEPLTLTYSRILQPRGLQRAAKTLRKQEALIWGRVSRRQEELQRPGCAVEQDG |
lnc-TOP3A-1:1 | BRCA-Luminal B | 16 | 0.988187 | coding | 119 | chr17 | 18119167 | 18357257 | - | 0.9813 | lnc-TOP3A-1 | 1 | -1.52 | -4.19 | 0.042 | 12 | noncoding | -0.217427831 | EAPVTTHLSQGPPSIR | n[145]EAPVTTHLSQGPPSIR | LREAPVTTHLSQGPPSIRLEFHLECGSQAWAGHPSEGLPTLHPSWGSRRTPGSVFPLCNEESGSLDPEPLTLTYSRILQPRGLQRAAKTLRKQEALIWGRVSRRQEELQRPGCAVEQDG |
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