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McDonnell Genome Institute
Washington University
Transcript
lnc-TOP3A-1:1
Chromosome
chr17
Gene Name
lnc-TOP3A-1
Start
18119167
CPC Label
coding
End
18357257
Cancer
BRCA-Luminal A
Strand
-
Peptide
EAPVTTHLSQGPPSIR
Modified Peptide
n[145]EAPVTTHLSQGPPSIR
Peptide Length
16
ORF Length
119
Open Reading Frame (ORF)
LREAPVTTHLSQGPPSIRLEFHLECGSQAWAGHPSEGLPTLHPSWGSRRTPGSVFPLCNEESGSLDPEPLTLTYSRILQPRGLQRAAKTLRKQEALIWGRVSRRQEELQRPGCAVEQDG
Conservation Score
1
PhyloCSF Frame 1
-1.52
No. of Spectra
12
CPC Coding Probability
0.988187
PhyloCSF Frame 2
-4.19
CNTI Index
noncoding
Max Probability
0.9813
PhyloCSF Frame 3
0.042
CNTI Score
-0.217427831
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