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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TP53TG3-4:2 | PRAD | 23 | 0.0479445 | noncoding | 53 | chr16 | 32262909 | 32265348 | - | 0.8055 | lnc-TP53TG3-4 | 0.01 | 0 | 0 | 0 | 3 | noncoding | -0.368593807 | VQVQAVFQVAFSAGSSMPLEGMK | VQVQAVFQVAFSAGSSMPLEGM[147]K | LGQSGEKRIQKGLRRQGLSSHGCPGPKVQVQAVFQVAFSAGSSMPLEGMKNPL |
lnc-TP53TG3-4:2 | PRAD | 23 | 0.0479445 | noncoding | 53 | chr16 | 32262909 | 32265348 | - | 0.8055 | lnc-TP53TG3-4 | 0.01 | 0 | 0 | 0 | 3 | noncoding | -0.368593807 | VQVQAVFQVAFSAGSSMPLEGMK | VQVQAVFQVAFSAGSSM[147]PLEGMK | LGQSGEKRIQKGLRRQGLSSHGCPGPKVQVQAVFQVAFSAGSSMPLEGMKNPL |
lnc-TP53TG3-4:2 | PRAD | 26 | 0.0479445 | noncoding | 53 | chr16 | 32262909 | 32265348 | - | 0.1781 | lnc-TP53TG3-4 | 0.01 | 0 | 0 | 0 | 2 | noncoding | -0.368593807 | VQVQAVFQVAFSAGSSMPLEGMKNPL | VQVQAVFQVAFSAGSSM[147]PLEGMKNPL | LGQSGEKRIQKGLRRQGLSSHGCPGPKVQVQAVFQVAFSAGSSMPLEGMKNPL |
lnc-TP53TG3-40:1 | BRCA-Luminal A | 19 | 0.162574 | noncoding | 110 | chr16 | 33938336 | 33938799 | - | 0.996 | lnc-TP53TG3-40 | 1 | 0 | 0 | 0 | 6 | noncoding | -0.355950895 | LSCAASGFTCSNAWMSWVR | n[145]LSCAASGFTCSNAWMSWVR | LLLFLKVSSVRCSWWSLPEALVQPGGSLRLSCAASGFTCSNAWMSWVRQAPGKGLEWVGRIKSKANGGTTDYAAPVKGRFTISRVDSKNTLYLQMNSLKTEDTAVYYCTT |
lnc-TP53TG3-40:1 | BRCA-Basal-like | 19 | 0.162574 | noncoding | 110 | chr16 | 33938336 | 33938799 | - | 0.996 | lnc-TP53TG3-40 | 1 | 0 | 0 | 0 | 6 | noncoding | -0.355950895 | LSCAASGFTCSNAWMSWVR | n[145]LSCAASGFTCSNAWMSWVR | LLLFLKVSSVRCSWWSLPEALVQPGGSLRLSCAASGFTCSNAWMSWVRQAPGKGLEWVGRIKSKANGGTTDYAAPVKGRFTISRVDSKNTLYLQMNSLKTEDTAVYYCTT |
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