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McDonnell Genome Institute
Washington University
Transcript
lnc-TP53TG3-40:1
Chromosome
chr16
Gene Name
lnc-TP53TG3-40
Start
33938336
CPC Label
noncoding
End
33938799
Cancer
BRCA-Luminal A
Strand
-
Peptide
LSCAASGFTCSNAWMSWVR
Modified Peptide
n[145]LSCAASGFTCSNAWMSWVR
Peptide Length
19
ORF Length
110
Open Reading Frame (ORF)
LLLFLKVSSVRCSWWSLPEALVQPGGSLRLSCAASGFTCSNAWMSWVRQAPGKGLEWVGRIKSKANGGTTDYAAPVKGRFTISRVDSKNTLYLQMNSLKTEDTAVYYCTT
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
6
CPC Coding Probability
0.162574
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.996
PhyloCSF Frame 3
0
CNTI Score
-0.355950895
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