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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TPRA1-4:1 | BRCA-HER2-enriched | 7 | 0.126134 | noncoding | 64 | chr3 | 127770568 | 127777156 | - | 0.9956 | lnc-TPRA1-4 | 0.505 | -4.043 | -4.721 | -5.076 | 1 | noncoding | -0.28952075 | LAFHAGR | n[145]LAFHAGR | LAFHAGRRASLTQRGQGGLREEGTHGPTQEALLRETDTQRQASIRHEVPASSPAKKGAGRLCSY |
lnc-TPRA1-4:1 | OSCC | 17 | 0.126134 | noncoding | 59 | chr3 | 127770568 | 127777156 | - | 0.9936 | lnc-TPRA1-4 | 1 | -4.043 | -2.52 | -5.076 | 22 | noncoding | -0.28952075 | TPGGGHTWTHPGGAAAR | n[145]TPGGGHTWTHPGGAAAR | LVPGLPAAAVTHWKPLGLPCRQKGQSHPEGARRTPGGGHTWTHPGGAAARDGYTTPGIY |
lnc-TPRG1-1:3 | BRCA-Luminal A | 7 | 0.417948 | noncoding | 73 | chr3 | 188178542 | 188180808 | + | 0.9996 | lnc-TPRG1-1 | 0.466 | 0 | 0 | 0 | 104 | noncoding | -0.33421025 | LFMIYGR | n[145]LFM[147]IYGR | LFMIYGRSFLVAGWVRESIIIADWCLCGHAGILGQRWGVGERGRERARQRERERVSKREGGRETERERERERE |
lnc-TPRG1-1:3 | BRCA-HER2-enriched | 7 | 0.417948 | noncoding | 73 | chr3 | 188178542 | 188180808 | + | 0.9996 | lnc-TPRG1-1 | 0.466 | 0 | 0 | 0 | 104 | noncoding | -0.33421025 | LFMIYGR | n[145]LFM[147]IYGR | LFMIYGRSFLVAGWVRESIIIADWCLCGHAGILGQRWGVGERGRERARQRERERVSKREGGRETERERERERE |
lnc-TPRG1-1:3 | BRCA-Luminal B | 7 | 0.417948 | noncoding | 73 | chr3 | 188178542 | 188180808 | + | 0.9996 | lnc-TPRG1-1 | 0.466 | 0 | 0 | 0 | 104 | noncoding | -0.33421025 | LFMIYGR | n[145]LFM[147]IYGR | LFMIYGRSFLVAGWVRESIIIADWCLCGHAGILGQRWGVGERGRERARQRERERVSKREGGRETERERERERE |
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