top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-TPRG1-1:3
Chromosome
chr3
Gene Name
lnc-TPRG1-1
Start
188178542
CPC Label
noncoding
End
188180808
Cancer
BRCA-Luminal A
Strand
+
Peptide
LFMIYGR
Modified Peptide
n[145]LFM[147]IYGR
Peptide Length
7
ORF Length
73
Open Reading Frame (ORF)
LFMIYGRSFLVAGWVRESIIIADWCLCGHAGILGQRWGVGERGRERARQRERERVSKREGGRETERERERERE
Conservation Score
0.466
PhyloCSF Frame 1
0
No. of Spectra
104
CPC Coding Probability
0.417948
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9996
PhyloCSF Frame 3
0
CNTI Score
-0.33421025
bottom of page