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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TRAPPC6B-2:2 | BRCA-Luminal B | 7 | 0.0547333 | noncoding | 131 | chr14 | 39265702 | 39267061 | - | 0.9956 | lnc-TRAPPC6B-2 | 0.958 | 0 | 0 | -2.384 | 56 | noncoding | -0.289979197 | DQGYVPR | n[145]DQGYVPR | LSCEPHNPKDQGYVPRAPASGGRGGGGGETSPRGVSAQPPPPRPRGRRQAQPRHPRLSFRSLAGACCLRPAEVLTAAYPGRPRQPREASRRRHSSQKNGLRGTRRCALPTTSGLWTLDRKASRLSCGLVRV |
lnc-TRAPPC6B-2:2 | BRCA-Luminal A | 7 | 0.0547333 | noncoding | 131 | chr14 | 39265702 | 39267061 | - | 0.9956 | lnc-TRAPPC6B-2 | 0.958 | 0 | 0 | -2.384 | 56 | noncoding | -0.289979197 | DQGYVPR | n[145]DQGYVPR | LSCEPHNPKDQGYVPRAPASGGRGGGGGETSPRGVSAQPPPPRPRGRRQAQPRHPRLSFRSLAGACCLRPAEVLTAAYPGRPRQPREASRRRHSSQKNGLRGTRRCALPTTSGLWTLDRKASRLSCGLVRV |
lnc-TRAPPC6B-2:2 | BRCA-HER2-enriched | 7 | 0.0547333 | noncoding | 131 | chr14 | 39265702 | 39267061 | - | 0.9956 | lnc-TRAPPC6B-2 | 0.958 | 0 | 0 | -2.384 | 56 | noncoding | -0.289979197 | DQGYVPR | n[145]DQGYVPR | LSCEPHNPKDQGYVPRAPASGGRGGGGGETSPRGVSAQPPPPRPRGRRQAQPRHPRLSFRSLAGACCLRPAEVLTAAYPGRPRQPREASRRRHSSQKNGLRGTRRCALPTTSGLWTLDRKASRLSCGLVRV |
lnc-TRAPPC6B-2:2 | BRCA-HER2-enriched | 9 | 0.0547333 | noncoding | 131 | chr14 | 39265702 | 39267061 | - | 0.5066 | lnc-TRAPPC6B-2 | 0.958 | 0 | 0 | -2.384 | 1 | noncoding | -0.289979197 | LSCEPHNPK | n[145]LSCEPHNPK | LSCEPHNPKDQGYVPRAPASGGRGGGGGETSPRGVSAQPPPPRPRGRRQAQPRHPRLSFRSLAGACCLRPAEVLTAAYPGRPRQPREASRRRHSSQKNGLRGTRRCALPTTSGLWTLDRKASRLSCGLVRV |
lnc-TRDMT1-5:1 | OV | 21 | 0.127492 | noncoding | 52 | chr10 | 17233324 | 17234833 | - | 0.5795 | lnc-TRDMT1-5 | 1 | -2.191 | 13.745 | 10.384 | 4 | noncoding | -0.322275677 | LVLTVPLRASTSQVRDCTCLR | n[145]LVLTVPLRASTSQVRDCTCLR | LVLTVPLRASTSQVRDCTCLRYSVDSCFAWRRASLFRLAASERFLAATLSYC |
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