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McDonnell Genome Institute
Washington University
Transcript
lnc-TRAPPC6B-2:2
Chromosome
chr14
Gene Name
lnc-TRAPPC6B-2
Start
39265702
CPC Label
noncoding
End
39267061
Cancer
BRCA-Basal-like
Strand
-
Peptide
DQGYVPR
Modified Peptide
n[145]DQGYVPR
Peptide Length
7
ORF Length
131
Open Reading Frame (ORF)
LSCEPHNPKDQGYVPRAPASGGRGGGGGETSPRGVSAQPPPPRPRGRRQAQPRHPRLSFRSLAGACCLRPAEVLTAAYPGRPRQPREASRRRHSSQKNGLRGTRRCALPTTSGLWTLDRKASRLSCGLVRV
Conservation Score
0.958
PhyloCSF Frame 1
0
No. of Spectra
56
CPC Coding Probability
0.0547333
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9956
PhyloCSF Frame 3
-2.384
CNTI Score
-0.289979197
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