top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TRIM39-2:1 | EOGC | 17 | 0.982569 | coding | 247 | chr6 | 30259561 | 30266951 | + | 0.1981 | lnc-TRIM39-2 | 1 | 1.32 | 2.606 | -2.836 | 1 | coding | 0.726672086 | RHLENGKETLQHADPPK | n[145]RHLENGKETLQHADPPK | LDRREHSGSDLPAQVGSGQILRAGQGLPEGKCMEWLRRHLENGKETLQHADPPKAHVTQHPISDHEATLRCWALGLYPAEITLTWQQDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGEEQRYMCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLFLLGAVVTGAVVAAAMWRKKSSGSNCAQYSDASHDTCKEDYACSCSGVCVLISFSPGCPSSLTAAGVIFPVINPTRWKAAPAHRSLWY |
lnc-TRIM39-2:1 | EOGC | 13 | 0.982569 | coding | 247 | chr6 | 30259561 | 30266951 | + | 0.3823 | lnc-TRIM39-2 | 1 | 1.32 | 2.606 | -2.836 | 5 | coding | 0.726672086 | WVAVVVPSGEEQR | n[145]WVAVVVPSGEEQR | LDRREHSGSDLPAQVGSGQILRAGQGLPEGKCMEWLRRHLENGKETLQHADPPKAHVTQHPISDHEATLRCWALGLYPAEITLTWQQDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGEEQRYMCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLFLLGAVVTGAVVAAAMWRKKSSGSNCAQYSDASHDTCKEDYACSCSGVCVLISFSPGCPSSLTAAGVIFPVINPTRWKAAPAHRSLWY |
lnc-TRIM39-2:1 | LUAD | 13 | 0.982569 | coding | 247 | chr6 | 30259561 | 30266951 | + | 0.8945 | lnc-TRIM39-2 | 1 | 1.32 | 2.606 | -2.836 | 1 | coding | 0.726672086 | WVAVVVPSGEEQR | n[230]WVAVVVPSGEEQR | LDRREHSGSDLPAQVGSGQILRAGQGLPEGKCMEWLRRHLENGKETLQHADPPKAHVTQHPISDHEATLRCWALGLYPAEITLTWQQDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGEEQRYMCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLFLLGAVVTGAVVAAAMWRKKSSGSNCAQYSDASHDTCKEDYACSCSGVCVLISFSPGCPSSLTAAGVIFPVINPTRWKAAPAHRSLWY |
lnc-TRIM39-2:1 | OV | 9 | 0.982569 | coding | 247 | chr6 | 30259561 | 30266951 | + | 0.8657 | lnc-TRIM39-2 | 1 | 1.32 | 2.606 | -2.836 | 5 | coding | 0.726672086 | AGQGLPEGK | n[145]AGQGLPEGK | LDRREHSGSDLPAQVGSGQILRAGQGLPEGKCMEWLRRHLENGKETLQHADPPKAHVTQHPISDHEATLRCWALGLYPAEITLTWQQDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGEEQRYMCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLFLLGAVVTGAVVAAAMWRKKSSGSNCAQYSDASHDTCKEDYACSCSGVCVLISFSPGCPSSLTAAGVIFPVINPTRWKAAPAHRSLWY |
lnc-TRIM39-2:1 | OV | 13 | 0.982569 | coding | 247 | chr6 | 30259561 | 30266951 | + | 0.8193 | lnc-TRIM39-2 | 1 | 1.32 | 2.606 | -2.836 | 2 | coding | 0.726672086 | WVAVVVPSGEEQR | n[145]WVAVVVPSGEEQR | LDRREHSGSDLPAQVGSGQILRAGQGLPEGKCMEWLRRHLENGKETLQHADPPKAHVTQHPISDHEATLRCWALGLYPAEITLTWQQDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGEEQRYMCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLFLLGAVVTGAVVAAAMWRKKSSGSNCAQYSDASHDTCKEDYACSCSGVCVLISFSPGCPSSLTAAGVIFPVINPTRWKAAPAHRSLWY |
Page 1 of 1
bottom of page