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McDonnell Genome Institute
Washington University
Transcript
lnc-TRIM39-2:1
Chromosome
chr6
Gene Name
lnc-TRIM39-2
Start
30259561
CPC Label
coding
End
30266951
Cancer
CCRC
Strand
+
Peptide
AGQGLPEGK
Modified Peptide
n[230]AGQGLPEGK
Peptide Length
9
ORF Length
247
Open Reading Frame (ORF)
LDRREHSGSDLPAQVGSGQILRAGQGLPEGKCMEWLRRHLENGKETLQHADPPKAHVTQHPISDHEATLRCWALGLYPAEITLTWQQDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGEEQRYMCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLFLLGAVVTGAVVAAAMWRKKSSGSNCAQYSDASHDTCKEDYACSCSGVCVLISFSPGCPSSLTAAGVIFPVINPTRWKAAPAHRSLWY
Conservation Score
1
PhyloCSF Frame 1
1.32
No. of Spectra
2
CPC Coding Probability
0.982569
PhyloCSF Frame 2
2.606
CNTI Index
coding
Max Probability
0.4546
PhyloCSF Frame 3
-2.836
CNTI Score
0.726672086
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