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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TSR3-1:2 | OSCC | 25 | 0.246426 | noncoding | 75 | chr16 | 1320181 | 1324783 | - | 0.7906 | lnc-TSR3-1 | 0.031 | 0 | 0 | 0 | 3 | noncoding | -0.249995563 | AGLAMWPRLVSNSWAQVTSHSGLAK | n[145]AGLAMWPRLVSNSWAQVTSHSGLAK | LGLQACTIIPGLIFFFFFFLKRAGLAMWPRLVSNSWAQVTSHSGLAKCWDYRHEPPPLANFLIFCRDRVSLCCPV |
lnc-TSHB-2:4 | OV | 37 | 0.466068 | noncoding | 162 | chr1 | 115179872 | 115233062 | + | 0.1606 | lnc-TSHB-2 | 1 | -1.818 | -3.868 | -3.688 | 1 | noncoding | -0.354766448 | QSLVQARMHIPHQAARPRGGPTLVALNPCGGGNGLVK | n[145]QSLVQARMHIPHQAARPRGGPTLVALNPCGGGNGLVK | LSGCSKHPMEKARTVGLELTGEVEQAGKQSLVQARMHIPHQAARPRGGPTLVALNPCGGGNGLVKIVTMCFVFVPEGPGTTLWHNEGIESQQSPRLGVLTRCQDPERQELSPCHEGAESCGLSPWKYHQKKLFRAKCIPCVGLAHVFLVNEADLPGFRRVSV |
lnc-TSHB-2:4 | OV | 15 | 0.466068 | noncoding | 162 | chr1 | 115179872 | 115233062 | + | 0.8876 | lnc-TSHB-2 | 1 | -1.818 | -3.868 | -3.688 | 1 | noncoding | -0.354766448 | TVGLELTGEVEQAGK | n[145]TVGLELTGEVEQAGK | LSGCSKHPMEKARTVGLELTGEVEQAGKQSLVQARMHIPHQAARPRGGPTLVALNPCGGGNGLVKIVTMCFVFVPEGPGTTLWHNEGIESQQSPRLGVLTRCQDPERQELSPCHEGAESCGLSPWKYHQKKLFRAKCIPCVGLAHVFLVNEADLPGFRRVSV |
lnc-TSHB-5:2 | LUAD | 8 | 0.0313568 | noncoding | 39 | chr1 | 114901194 | 114904181 | + | 0.9954 | lnc-TSHB-5 | 0.873 | 0 | 0 | 0 | 10 | noncoding | -0.454539689 | LLLHIYYK | n[230]LLLHIYYK | LLLHIYYKNQLAMFVWVYFWTLLHFLGVFVYSFANIAVS |
lnc-TSHR-7:1 | BRCA-Luminal B | 17 | 0.249163 | noncoding | 90 | chr14 | 80822523 | 80822796 | + | 0.9572 | lnc-TSHR-7 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.30730751 | ADAGKEGNSPVENGDAK | n[145]ADAGKEGNSPVENGDAK | MPKRKAEGDAKGDKAKVKDESHRRSMRLSAKPAPPKPEPKRKKAPAKKGEKVPKGKKGKADAGKEGNSPVENGDAKTDQAHKTEGAGDAK |
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