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McDonnell Genome Institute
Washington University
Transcript
lnc-TSHB-2:4
Chromosome
chr1
Gene Name
lnc-TSHB-2
Start
115179872
CPC Label
noncoding
End
115233062
Cancer
OV
Strand
+
Peptide
QSLVQARMHIPHQAARPRGGPTLVALNPCGGGNGLVK
Modified Peptide
n[145]QSLVQARMHIPHQAARPRGGPTLVALNPCGGGNGLVK
Peptide Length
37
ORF Length
162
Open Reading Frame (ORF)
LSGCSKHPMEKARTVGLELTGEVEQAGKQSLVQARMHIPHQAARPRGGPTLVALNPCGGGNGLVKIVTMCFVFVPEGPGTTLWHNEGIESQQSPRLGVLTRCQDPERQELSPCHEGAESCGLSPWKYHQKKLFRAKCIPCVGLAHVFLVNEADLPGFRRVSV
Conservation Score
1
PhyloCSF Frame 1
-1.818
No. of Spectra
1
CPC Coding Probability
0.466068
PhyloCSF Frame 2
-3.868
CNTI Index
noncoding
Max Probability
0.1606
PhyloCSF Frame 3
-3.688
CNTI Score
-0.354766448
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