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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TUBA1C-1:14 | BRCA-HER2-enriched | 12 | 0.12951 | noncoding | 67 | chr12 | 49131605 | 49168865 | + | 0.9989 | lnc-TUBA1C-1 | 0.342 | 0 | 0 | 0 | 7 | noncoding | -0.327226222 | LASHDGAQLLGR | n[145]LASHDGAQLLGR | LSSQHLRRPRQEDRLNPRVRDQPGHQNENLSLQKKIFKLASHDGAQLLGRLRQKGHFNTGGQVCSKL |
lnc-TUBA1C-1:14 | BRCA-Luminal B | 12 | 0.12951 | noncoding | 67 | chr12 | 49131605 | 49168865 | + | 0.9989 | lnc-TUBA1C-1 | 0.342 | 0 | 0 | 0 | 7 | noncoding | -0.327226222 | LASHDGAQLLGR | n[145]LASHDGAQLLGR | LSSQHLRRPRQEDRLNPRVRDQPGHQNENLSLQKKIFKLASHDGAQLLGRLRQKGHFNTGGQVCSKL |
lnc-TUBA1C-1:14 | BRCA-Luminal A | 12 | 0.12951 | noncoding | 67 | chr12 | 49131605 | 49168865 | + | 0.9989 | lnc-TUBA1C-1 | 0.342 | 0 | 0 | 0 | 7 | noncoding | -0.327226222 | LASHDGAQLLGR | n[145]LASHDGAQLLGR | LSSQHLRRPRQEDRLNPRVRDQPGHQNENLSLQKKIFKLASHDGAQLLGRLRQKGHFNTGGQVCSKL |
lnc-TUBA1C-1:14 | OV | 19 | 0.12951 | noncoding | 79 | chr12 | 49131605 | 49168865 | + | 0.9395 | lnc-TUBA1C-1 | 0.399 | 0 | 0 | 0 | 1 | noncoding | -0.327226222 | LGSQDSIFFHTNTNNNNNK | n[145]LGSQDSIFFHTNTNNNNNK | LGSQDSIFFHTNTNNNNNKRTRHLQENSIFIERYYEDIMINVLRDISRIIWRYQITKMLILLKLPYKLSALGRWSRHTS |
lnc-TUBA1C-1:14 | OV | 14 | 0.12951 | noncoding | 76 | chr12 | 49131605 | 49168865 | + | 0.7027 | lnc-TUBA1C-1 | 0.308 | 0 | 0 | 0 | 1 | noncoding | -0.327226222 | MVILTDTVLQSVTR | n[145]MVILTDTVLQSVTR | MVILTDTVLQSVTRDKNLPSASEGSATSKTLPRKTGRPTGPKQNSFSSLFCLDWFFNPFSYLFLLLMLNVTLSWNV |
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