top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-TUBA1C-1:14
Chromosome
chr12
Gene Name
lnc-TUBA1C-1
Start
49131605
CPC Label
noncoding
End
49168865
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
LASHDGAQLLGR
Modified Peptide
n[145]LASHDGAQLLGR
Peptide Length
12
ORF Length
67
Open Reading Frame (ORF)
LSSQHLRRPRQEDRLNPRVRDQPGHQNENLSLQKKIFKLASHDGAQLLGRLRQKGHFNTGGQVCSKL
Conservation Score
0.342
PhyloCSF Frame 1
0
No. of Spectra
7
CPC Coding Probability
0.12951
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9989
PhyloCSF Frame 3
0
CNTI Score
-0.327226222
bottom of page